Retrieve pathways containing the query text.
findPathwaysByText(query)
| query | A |
|---|
A dataframe of pathway attributes in addition to query result score
The score is from a lucene index search engine, ranging from 0 to 1 with higher scores for better matches.
{ findPathwaysByText('cancer') }#> score id url #> 1: 1.48345970 WP1984 https://www.wikipathways.org/index.php/Pathway:WP1984 #> 2: 1.48345970 WP3260 https://www.wikipathways.org/index.php/Pathway:WP3260 #> 3: 1.29852510 WP2868 https://www.wikipathways.org/index.php/Pathway:WP2868 #> 4: 1.23793510 WP4262 https://www.wikipathways.org/index.php/Pathway:WP4262 #> 5: 1.20841570 WP3252 https://www.wikipathways.org/index.php/Pathway:WP3252 #> --- #> 115: 0.02568957 WP566 https://www.wikipathways.org/index.php/Pathway:WP566 #> 116: 0.02201963 WP3265 https://www.wikipathways.org/index.php/Pathway:WP3265 #> 117: 0.02201963 WP2355 https://www.wikipathways.org/index.php/Pathway:WP2355 #> 118: 0.01834969 WP4857 https://www.wikipathways.org/index.php/Pathway:WP4857 #> 119: 0.01834969 WP4754 https://www.wikipathways.org/index.php/Pathway:WP4754 #> name #> 1: Integrated Breast Cancer Pathway #> 2: Integrated Breast Cancer Pathway #> 3: TCA Cycle Nutrient Utilization and Invasiveness of Ovarian Cancer #> 4: Breast cancer pathway #> 5: TCA Cycle Nutrient Utilization and Invasiveness of Ovarian Cancer #> --- #> 115: Canonical wnt signaling #> 116: Corticotropin-releasing hormone #> 117: Corticotropin-releasing hormone signaling pathway #> 118: Endothelin Pathway #> 119: IL-18 signaling pathway #> species revision #> 1: Homo sapiens 113594 #> 2: Bos taurus 113595 #> 3: Homo sapiens 112051 #> 4: Homo sapiens 108103 #> 5: Bos taurus 108105 #> --- #> 115: Danio rerio 96484 #> 116: Bos taurus 108255 #> 117: Homo sapiens 108254 #> 118: Homo sapiens 111629 #> 119: Homo sapiens 115147