Retrieve pathways containing the query Xref by identifier and system code.
findPathwaysByXref(identifier, systemCode)
| identifier | ( |
|---|---|
| systemCode | ( |
A dataframe of pathway attributes in addition to query result score
Note: there will be multiple listings of the same pathway if the Xref is present mutiple times.
The score is from a lucene index search engine, ranging from 0 to 1 with higher scores for better matches.
{ findPathwaysByXref('ENSG00000232810','En') }#> score id url #> 1: 0.3951413 WP3893 https://www.wikipathways.org/index.php/Pathway:WP3893 #> 2: 0.3951413 WP2882 https://www.wikipathways.org/index.php/Pathway:WP2882 #> 3: 0.3951413 WP1584 https://www.wikipathways.org/index.php/Pathway:WP1584 #> 4: 0.3951413 WP2431 https://www.wikipathways.org/index.php/Pathway:WP2431 #> 5: 0.3951413 WP4673 https://www.wikipathways.org/index.php/Pathway:WP4673 #> 6: 0.3951413 WP2059 https://www.wikipathways.org/index.php/Pathway:WP2059 #> 7: 0.3951413 WP3599 https://www.wikipathways.org/index.php/Pathway:WP3599 #> 8: 0.3951413 WP3863 https://www.wikipathways.org/index.php/Pathway:WP3863 #> 9: 0.3951413 WP4008 https://www.wikipathways.org/index.php/Pathway:WP4008 #> 10: 0.3951413 WP3865 https://www.wikipathways.org/index.php/Pathway:WP3865 #> 11: 0.3951413 WP3624 https://www.wikipathways.org/index.php/Pathway:WP3624 #> 12: 0.3951413 WP4341 https://www.wikipathways.org/index.php/Pathway:WP4341 #> 13: 0.3951413 WP4298 https://www.wikipathways.org/index.php/Pathway:WP4298 #> 14: 0.3951413 WP4666 https://www.wikipathways.org/index.php/Pathway:WP4666 #> 15: 0.3951413 WP3941 https://www.wikipathways.org/index.php/Pathway:WP3941 #> 16: 0.3951413 WP2813 https://www.wikipathways.org/index.php/Pathway:WP2813 #> 17: 0.3951413 WP262 https://www.wikipathways.org/index.php/Pathway:WP262 #> 18: 0.3951413 WP2873 https://www.wikipathways.org/index.php/Pathway:WP2873 #> 19: 0.3951413 WP2571 https://www.wikipathways.org/index.php/Pathway:WP2571 #> 20: 0.3951413 WP4329 https://www.wikipathways.org/index.php/Pathway:WP4329 #> 21: 0.3951413 WP4136 https://www.wikipathways.org/index.php/Pathway:WP4136 #> 22: 0.3951413 WP4864 https://www.wikipathways.org/index.php/Pathway:WP4864 #> 23: 0.3951413 WP3287 https://www.wikipathways.org/index.php/Pathway:WP3287 #> 24: 0.3951413 WP4066 https://www.wikipathways.org/index.php/Pathway:WP4066 #> 25: 0.3951413 WP4063 https://www.wikipathways.org/index.php/Pathway:WP4063 #> 26: 0.3951413 WP4969 https://www.wikipathways.org/index.php/Pathway:WP4969 #> 27: 0.2794071 WP2795 https://www.wikipathways.org/index.php/Pathway:WP2795 #> 28: 0.2794071 WP4847 https://www.wikipathways.org/index.php/Pathway:WP4847 #> 29: 0.2794071 WP129 https://www.wikipathways.org/index.php/Pathway:WP129 #> 30: 0.2794071 WP314 https://www.wikipathways.org/index.php/Pathway:WP314 #> 31: 0.2794071 WP2513 https://www.wikipathways.org/index.php/Pathway:WP2513 #> 32: 0.2794071 WP1449 https://www.wikipathways.org/index.php/Pathway:WP1449 #> 33: 0.2794071 WP4481 https://www.wikipathways.org/index.php/Pathway:WP4481 #> 34: 0.2794071 WP1544 https://www.wikipathways.org/index.php/Pathway:WP1544 #> 35: 0.2794071 WP4482 https://www.wikipathways.org/index.php/Pathway:WP4482 #> 36: 0.2794071 WP3297 https://www.wikipathways.org/index.php/Pathway:WP3297 #> 37: 0.2794071 WP530 https://www.wikipathways.org/index.php/Pathway:WP530 #> 38: 0.2794071 WP4891 https://www.wikipathways.org/index.php/Pathway:WP4891 #> 39: 0.2794071 WP236 https://www.wikipathways.org/index.php/Pathway:WP236 #> 40: 0.2794071 WP4747 https://www.wikipathways.org/index.php/Pathway:WP4747 #> 41: 0.2794071 WP176 https://www.wikipathways.org/index.php/Pathway:WP176 #> 42: 0.2794071 WP727 https://www.wikipathways.org/index.php/Pathway:WP727 #> 43: 0.2794071 WP4496 https://www.wikipathways.org/index.php/Pathway:WP4496 #> 44: 0.2794071 WP254 https://www.wikipathways.org/index.php/Pathway:WP254 #> 45: 0.2794071 WP1533 https://www.wikipathways.org/index.php/Pathway:WP1533 #> 46: 0.2794071 WP75 https://www.wikipathways.org/index.php/Pathway:WP75 #> 47: 0.2794071 WP4478 https://www.wikipathways.org/index.php/Pathway:WP4478 #> 48: 0.2794071 WP2328 https://www.wikipathways.org/index.php/Pathway:WP2328 #> 49: 0.2794071 WP3851 https://www.wikipathways.org/index.php/Pathway:WP3851 #> 50: 0.2794071 WP231 https://www.wikipathways.org/index.php/Pathway:WP231 #> 51: 0.2794071 WP3617 https://www.wikipathways.org/index.php/Pathway:WP3617 #> 52: 0.2794071 WP2036 https://www.wikipathways.org/index.php/Pathway:WP2036 #> 53: 0.2794071 WP3611 https://www.wikipathways.org/index.php/Pathway:WP3611 #> 54: 0.2794071 WP560 https://www.wikipathways.org/index.php/Pathway:WP560 #> 55: 0.2794071 WP4816 https://www.wikipathways.org/index.php/Pathway:WP4816 #> 56: 0.2794071 WP2864 https://www.wikipathways.org/index.php/Pathway:WP2864 #> 57: 0.2794071 WP4304 https://www.wikipathways.org/index.php/Pathway:WP4304 #> 58: 0.2794071 WP4857 https://www.wikipathways.org/index.php/Pathway:WP4857 #> 59: 0.2794071 WP15 https://www.wikipathways.org/index.php/Pathway:WP15 #> 60: 0.2794071 WP2586 https://www.wikipathways.org/index.php/Pathway:WP2586 #> 61: 0.2794071 WP4493 https://www.wikipathways.org/index.php/Pathway:WP4493 #> 62: 0.2794071 WP4396 https://www.wikipathways.org/index.php/Pathway:WP4396 #> 63: 0.2794071 WP4480 https://www.wikipathways.org/index.php/Pathway:WP4480 #> 64: 0.2794071 WP706 https://www.wikipathways.org/index.php/Pathway:WP706 #> 65: 0.2794071 WP2447 https://www.wikipathways.org/index.php/Pathway:WP2447 #> 66: 0.2794071 WP382 https://www.wikipathways.org/index.php/Pathway:WP382 #> 67: 0.2794071 WP5044 https://www.wikipathways.org/index.php/Pathway:WP5044 #> 68: 0.2794071 WP2751 https://www.wikipathways.org/index.php/Pathway:WP2751 #> 69: 0.2794071 WP3380 https://www.wikipathways.org/index.php/Pathway:WP3380 #> 70: 0.2794071 WP3398 https://www.wikipathways.org/index.php/Pathway:WP3398 #> 71: 0.2794071 WP4066 https://www.wikipathways.org/index.php/Pathway:WP4066 #> 72: 0.2794071 WP4063 https://www.wikipathways.org/index.php/Pathway:WP4063 #> 73: 0.2794071 WP4754 https://www.wikipathways.org/index.php/Pathway:WP4754 #> 74: 0.2794071 WP5039 https://www.wikipathways.org/index.php/Pathway:WP5039 #> score id url #> name #> 1: Development and heterogeneity of the ILC family #> 2: Nuclear Receptors Meta-Pathway #> 3: Type II diabetes mellitus #> 4: Spinal Cord Injury #> 5: Genes involved in male infertility #> 6: Alzheimers Disease #> 7: Transcription factor regulation in adipogenesis #> 8: T-Cell antigen Receptor (TCR) pathway during Staphylococcus aureus infection #> 9: NO/cGMP/PKG mediated Neuroprotection #> 10: Novel intracellular components of RIG-I-like receptor (RLR) pathway #> 11: Lung fibrosis #> 12: Non-genomic actions of 1,25 dihydroxyvitamin D3 #> 13: Viral Acute Myocarditis #> 14: Hepatitis B infection #> 15: Oxidative Damage #> 16: Mammary gland development pathway - Embryonic development (Stage 1 of 4) #> 17: EBV LMP1 signaling #> 18: Aryl Hydrocarbon Receptor Pathway #> 19: Polycystic Kidney Disease Pathway #> 20: miRNAs involvement in the immune response in sepsis #> 21: Fibrin Complement Receptor 3 Signaling Pathway #> 22: Host-pathogen interaction of human corona viruses - apoptosis #> 23: Overview of nanoparticle effects #> 24: Interleukin-4 and Interleukin-13 signaling #> 25: Interleukin-10 signaling #> 26: RAS and Bradykinin pathways in COVID-19 #> 27: Cardiac Hypertrophic Response #> 28: AXL signaling pathway #> 29: Matrix Metalloproteinases #> 30: Fas Ligand (FasL) pathway and Stress induction of Heat Shock Proteins (HSP) regulation #> 31: Nanoparticle triggered regulated necrosis #> 32: Regulation of toll-like receptor signaling pathway #> 33: Resistin as a regulator of inflammation #> 34: MicroRNAs in cardiomyocyte hypertrophy #> 35: Vitamin D in inflammatory diseases #> 36: EV release from cardiac cells and their functional effects #> 37: Cytokines and Inflammatory Response #> 38: COVID-19 Adverse Outcome Pathway #> 39: Adipogenesis #> 40: Netrin-UNC5B signaling Pathway #> 41: Folate Metabolism #> 42: Monoamine Transport #> 43: Signal transduction through IL1R #> 44: Apoptosis #> 45: Vitamin B12 Metabolism #> 46: Toll-like Receptor Signaling Pathway #> 47: LTF danger signal response pathway #> 48: Allograft Rejection #> 49: TLR4 Signaling and Tolerance #> 50: TNF alpha Signaling Pathway #> 51: Photodynamic therapy-induced NF-kB survival signaling #> 52: TNF related weak inducer of apoptosis (TWEAK) Signaling Pathway #> 53: Photodynamic therapy-induced AP-1 survival signaling. #> 54: TGF-beta Receptor Signaling #> 55: TGF-beta Receptor Signalling in Skeletal Dysplasias #> 56: Apoptosis-related network due to altered Notch3 in ovarian cancer #> 57: Oligodendrocyte specification and differentiation, leading to Myelin Components for CNS #> 58: Endothelin Pathway #> 59: Selenium Micronutrient Network #> 60: Aryl Hydrocarbon Receptor Netpath #> 61: Cells and Molecules involved in local acute inflammatory response #> 62: Nonalcoholic fatty liver disease #> 63: Role of Altered Glycolysation of MUC1 in Tumour Microenvironment #> 64: Sudden Infant Death Syndrome (SIDS) Susceptibility Pathways #> 65: Amyotrophic lateral sclerosis (ALS) #> 66: MAPK Signaling Pathway #> 67: Kynurenine Pathway and links to Cellular Senescence #> 68: Transcriptional regulation of white adipocyte differentiation #> 69: TNF signaling #> 70: TNFR2 non-canonical NF-kB pathway #> 71: Interleukin-4 and Interleukin-13 signaling #> 72: Interleukin-10 signaling #> 73: IL-18 signaling pathway #> 74: SARS-CoV-2 Innate Immunity Evasion and Cell-specific immune response #> name #> species revision #> 1: Homo sapiens 106386 #> 2: Homo sapiens 103038 #> 3: Homo sapiens 111210 #> 4: Homo sapiens 106712 #> 5: Homo sapiens 106810 #> 6: Homo sapiens 108233 #> 7: Homo sapiens 105845 #> 8: Homo sapiens 106753 #> 9: Homo sapiens 110707 #> 10: Homo sapiens 106524 #> 11: Homo sapiens 110182 #> 12: Homo sapiens 107169 #> 13: Homo sapiens 110705 #> 14: Homo sapiens 107486 #> 15: Homo sapiens 106568 #> 16: Homo sapiens 102405 #> 17: Homo sapiens 106391 #> 18: Homo sapiens 106304 #> 19: Homo sapiens 108308 #> 20: Homo sapiens 101725 #> 21: Homo sapiens 106418 #> 22: Homo sapiens 113801 #> 23: Homo sapiens 113822 #> 24: Homo sapiens 115055 #> 25: Homo sapiens 115095 #> 26: Homo sapiens 115143 #> 27: Homo sapiens 106724 #> 28: Homo sapiens 111812 #> 29: Homo sapiens 106640 #> 30: Homo sapiens 109375 #> 31: Homo sapiens 110691 #> 32: Homo sapiens 106494 #> 33: Homo sapiens 102529 #> 34: Homo sapiens 108800 #> 35: Homo sapiens 112969 #> 36: Homo sapiens 106734 #> 37: Homo sapiens 111164 #> 38: Homo sapiens 111616 #> 39: Homo sapiens 105873 #> 40: Homo sapiens 108877 #> 41: Homo sapiens 107123 #> 42: Homo sapiens 107191 #> 43: Homo sapiens 102693 #> 44: Homo sapiens 106302 #> 45: Homo sapiens 107121 #> 46: Homo sapiens 111250 #> 47: Homo sapiens 103756 #> 48: Homo sapiens 106557 #> 49: Homo sapiens 105835 #> 50: Homo sapiens 111053 #> 51: Homo sapiens 106541 #> 52: Homo sapiens 105837 #> 53: Homo sapiens 90923 #> 54: Homo sapiens 106477 #> 55: Homo sapiens 111739 #> 56: Homo sapiens 108133 #> 57: Homo sapiens 112156 #> 58: Homo sapiens 111629 #> 59: Homo sapiens 107118 #> 60: Homo sapiens 107439 #> 61: Homo sapiens 102660 #> 62: Homo sapiens 98945 #> 63: Homo sapiens 107458 #> 64: Homo sapiens 113813 #> 65: Homo sapiens 113794 #> 66: Homo sapiens 113991 #> 67: Homo sapiens 114613 #> 68: Homo sapiens 114880 #> 69: Homo sapiens 114940 #> 70: Homo sapiens 115048 #> 71: Homo sapiens 115055 #> 72: Homo sapiens 115095 #> 73: Homo sapiens 115147 #> 74: Homo sapiens 115153 #> species revision